“Choose an enemy trooper mini at range 1 that is not a commander. It suffers 1 wound.”

So, can this be used to auto-wound Boba Fett, for example?

Yup! Operatives are not Commanders.

(Unless your commander is defeated and you promote Boba Fett to commander. Then he’s safe ? )

But with the new errata, Operatives can no longer be the target of force choke.