OK, here's something that's been niggling me for a while.
During the Age of Apostacy, and subsequent to Vandire's Reign of Blood the Ministorum was forbidding from having 'men under arms'. This is the whole reason for the foundation of the Adeptus Sororitas (from the prior Daughters/Brides of the Emperor).
In essence, the men of the Adeptus Ministorum are forbidden from carrying weapons.
Yet the clerics and priests in DH are basically combat - preachers, armed to the teeth and ready to burn and kill with abandon.
How dose that fit with the fluff then?