When you go up in honor, you gain Virtue Advantages. When you go down, you gain flaws. I see the fame and infamy advantages and disadvantages for glory, but now virtues or flaws. Am I right that these just aren't in the beta test doc?

You are looking for the Paragon of Bushido Tenet and Disdain for Bushido Tenet. Pages 65 and 70, respectively.