I picked up everything during the Holiday sale.

I despise the boxes it comes in.

What is a good way to store and sort the books/cards/tokens?

A quick search in the forum could have helped you

https://community.fantasyflightgames.com/topic/185040-how-to-store-cards/

My simple solution: https://dl.dropboxusercontent.com/u/14855200/raaco.JPG

Fits well with sleeved cards and I can pick the things I need from the boxes.

Where did you get those cases from? They fit the cards perfectly.

I got them at a hardwarestore (in Sweden), the brand is called Raaco. I have 5 or 6 of these to store all tokens, dice, standups, a lot of the cards, etc.

Player action cards and talents I keep in Ultra Pro binders ( http://www.ultrapro.com/products/medium/81406.jpg ) instead, to make it easier to flip through.