I actually have something similar going on with my players! They've had some run-ins with a crazed, rogue Inquisitor that had it in for one of the PCs (who is a decedent of the Sith race) and now the Alliance is basically looking at the problem and realizing they need to do something pro-active about these Inquisitors. Thus will be born OPERATION: RED SAND; An off the books Rebel cell of hired guns and force sensitives tasked with countering the Inquisition. I plan on upgrading their ship to a Blackade Runner and sorta running with a "Mass Effect" style game with them running around saving/recruiting people.I am currently GMing a campaign in which the Inquisitors are the main enemy. They are essentially playing the role of a behind the scenes dark side clandestine force controlled by The Emperor. My PCs are new members of a secret Rebel force called the Order Assassinorum (thanks 40k!) whose entire job is defeating the Inquisitorius (as I have deemed it for my game).
Essentially the Inquisitors have secret bases on several planets that the players are tasked with infiltrating and destroying. It's kind of a cool use of F&D material in a very Age of Rebellion type Rebel setting.
My endgame is to eventually have them "take part" in the Battle of Endor by launching an assault on the Inquisition's HQ during the attack on the second Death Star in an attempt to ensure that the Inquisition is not there to reclaim control when the Emperor falls. As I imagine that's something that the Alliance would have to do.
I'd be interested in what kind of cool Inquisitors you come up with so I can throw them at my PCs! :-D
I absolutely love this set up, it's a great way to integrate Edge and F&D charcters in an AoR game! Also like the "Mass Effect" style campaign. And while the Blockade Runner si a great ship (and very customizable) you can also consider the Marauder corvette who has an hangar and some fighters too, they can come handy in solo missions. I like the idea for the Battle of Endor but i'd let them really be part of it: they could be tasked to infiltrate the Executor and search Darth Vader's quarters or the Inquisitor's quarters (there must be some)to find the coordinates for the Inquisiton's base on Prakith, which being in the deep core is absurdly hard to travel to. Clearance codes for the deep core security zone would be quite handy too. Then they would have to flee the Executor before it crashes into the Death Star, maybe "helping it" by doing damage to the ship. then in the aftermath of Endor they strike at the Inquisition base.
As for any cool Inquisitors i think all of them are Force sensitive, so no non FS baddie, but one of them could be barely FS and overcome this buy having a really high inteligence cunning and knowledge, and relying on the Suppress power to reduce the other force sensitives abilites (think of a walking Ysalamiri) and on liberal amounts of cortosis armors or weapons to help. Imagine a force sensitive Cad Bane to get a picture.