Pfft, I will continue to use the real tokens! I find it MUCH easier to drag a token to the side of the board than to toggle through all of the actions. Especially if it's a F+E, and then I have to do it twice. I'll toggle on the ion and crit (and stress on Tycho) on the ship, but I also put the ion token out. I find it much easier to see the token than the craft status.
But taking 2 Focus + 1 Evade on Soontir is such a pain on the base, and feels faster to drop and pull tokens. Stress tokens, crit markers, and the "has TL icon", though, way easier to use the ship base, especially since it stacks stress and crits easily.
The main problem I have with the actual tokens, is that they need to be moved around constantly when there's a furball and it can get tricky to remember which ship had which token.
That, and, from my experience, it takes longer for people to use the tokens than to use the actions on the ship.
With most ships, I can hit Ctrl+Shift+3 for a 3-turn-left, then Ctrl+A for a focus. Done.
For Fel? Alt+2 for 2-bank-right, Ctrl+1 for boost left, Ctrl+A x 3 for Evade, Shift+S for stress, and Shift+A for focus.
Sure, at first it'll be a little slower than dragging stuff around, but once you get used to using the ship actions, they are much faster than tokens, even for Fel. It's like typing with more than 2 fingers: takes a while to get the hang of it, but much more efficient in the long run.