Not quite the same as standard house rules, so I felt this deserved a thread of its own.
In previous campaigns, I used bits from DH and pre-release DW in RT. And bits from DH, RT and BC in DW. Mostly gear, but some opponents especially in DW.
For a new Rogue Trader game, I'd consider Only War for plundering. The las strength rules and the weapons stats are obvious choices. Aptitudes could be great if I were willing to rework the system.
What do you all make of importing rules from the other 40k games?